Domain ID e1pv4D2

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  • A: alpha arrays
  • X: LEM/SAP HeH motif-like
  • H: LEM/SAP HeH motif
  • T: LEM/SAP HeH motif
  • F: Rho_N
UID: 000048745
Type: Automatic domain
Parent: e1a62A2
Range: D:1-47
PDB: 1pv4
PDB Description: Transcription termination factor rho
UniProt: P0AG30
Species: Escherichia coli

Structure of domain e1pv4D2

Domains in the same chain:

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e1pv4D2 D:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1pv4D1 D:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pv4D3 D:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1pv4A2 A:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1pv4A1 A:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pv4A3 A:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1pv4B1 B:51-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pv4B2 B:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1pv4C2 C:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1pv4C1 C:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pv4C3 C:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1pv4D2 D:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1pv4D1 D:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pv4D3 D:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1pv4E6 E:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1pv4E5 E:48-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pv4E4 E:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1pv4F2 F:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1pv4F1 F:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pv4F3 F:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e1pv4D2 of H-group "LEM/SAP HeH motif":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pv4C1 D:x,y,z->C:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol
e1pv4C3 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e1pv4F1 D:x,y,z->F:X-1/2,Y+1/2,Z Nucleic acid-binding proteins Interaction Interface Pymol