Domain ID e1pvdB3

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_C
UID: 000110912
Type: Automatic domain
Parent: e1pvdA3
Range: B:361-556
Ligands: MG TPP
PDB: 1pvd
PDB Description: PYRUVATE DECARBOXYLASE
UniProt: P06169
Species: Saccharomyces cerevisiae

Structure of domain e1pvdB3

Structural contacts of domain e1pvdB3 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pvdA3 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1pvdA2 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1pvdA1 B:x,y,z->A:X-1/2,Y+1/2,Z Rossmann-related Interaction Interface Pymol
e1pvdB3 B:x,y,z->B:-X,Y,-Z+1 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1pvdB3 B:-X,Y,-Z+1->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1pvdA1 B:x,y,z->A:X-1/2,Y-1/2,Z Rossmann-related Interaction Interface Pymol