Domain ID e1pyyA6

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  • A: a+b three layers
  • X: Profilin-like
  • H: a+b domain in beta-lactamase/transpeptidase-like proteins
  • T: a+b domain in beta-lactamase/transpeptidase-like proteins
  • F: Transpeptidase
UID: 001117555
Type: Manual and representative domain
Range: A:264-333,A:456-631
Ligands: OSU SO4
PDB: 1pyy
PDB Description: Penicillin-binding protein 2X
UniProt: P59676
Species:

Structure of domain e1pyyA6

Domains in the same chain:

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e1pyyA1 A:73-92,A:184-263 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e1pyyA5 A:93-183 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e1pyyA6 A:264-333,A:456-631 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1pyyA2 A:334-455 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1pyyA3 A:632-692 CI-2 family of serine protease inhibitors-like Penicillin-binding protein 2x (pbp-2x)-C Penicillin-binding protein 2x (pbp-2x)-C
e1pyyA4 A:693-750 CI-2 family of serine protease inhibitors-like Penicillin-binding protein 2x (pbp-2x)-C Penicillin-binding protein 2x (pbp-2x)-C

Domains in the same PDB:

e1pyyA1 A:73-92,A:184-263 Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain Penicillin binding protein dimerisation domain
e1pyyA5 A:93-183 ClpS-like Penicillin binding protein ClpS-like domain Penicillin binding protein ClpS-like domain
e1pyyA6 A:264-333,A:456-631 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1pyyA2 A:334-455 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1pyyA3 A:632-692 CI-2 family of serine protease inhibitors-like Penicillin-binding protein 2x (pbp-2x)-C Penicillin-binding protein 2x (pbp-2x)-C
e1pyyA4 A:693-750 CI-2 family of serine protease inhibitors-like Penicillin-binding protein 2x (pbp-2x)-C Penicillin-binding protein 2x (pbp-2x)-C

Structural contacts of domain e1pyyA6 of H-group "a+b domain in beta-lactamase/transpeptidase-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pyyA5 A:x,y,z->A:-X,Y,-Z Penicillin binding protein ClpS-like domain Interaction Interface Pymol
e1pyyA5 A:-X,Y,-Z->A:x,y,z Penicillin binding protein ClpS-like domain Interaction Interface Pymol
e1pyyA2 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e1pyyA2 A:-X+1/2,Y-1/2,-Z+1->A:x,y,z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol