Domain ID e1qhdA1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Viral protein domain
  • T: Viral protein domain
  • F: Rota_Capsid_VP6
UID: 000001263
Type: Manual and representative domain
Range: A:149-332
Ligands: CA CL ZN
PDB: 1qhd
PDB Description: VIRAL CAPSID VP6
UniProt: P04509
Species:

Structure of domain e1qhdA1

Structural contacts of domain e1qhdA1 of H-group "Viral protein domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1qhdA2 A:x,y,z->A:Z,X,Y A virus capsid protein alpha-helical domain Interaction Interface Pymol
e1qhdA1 A:x,y,z->A:Z,X,Y Viral protein domain Interaction Interface Pymol
e1qhdA1 A:Z,X,Y->A:x,y,z Viral protein domain Interaction Interface Pymol
e1qhdA2 A:x,y,z->A:Z+1/4,-Y+1/4,X-1/4 A virus capsid protein alpha-helical domain Interaction Interface Pymol
e1qhdA1 A:x,y,z->A:Z+1/4,-Y+1/4,X-1/4 Viral protein domain Interaction Interface Pymol
e1qhdA2 A:Z+1/4,-Y+1/4,X-1/4->A:x,y,z A virus capsid protein alpha-helical domain Interaction Interface Pymol
e1qhdA1 A:Z+1/4,-Y+1/4,X-1/4->A:x,y,z Viral protein domain Interaction Interface Pymol