Domain ID e1qrkB1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: Transglut_N
UID: 000032810
Type: Automatic domain
Parent: e1ex0A1
Range: B:10-190
PDB: 1qrk
PDB Description: PROTEIN (COAGULATION FACTOR XIII)
UniProt: P00488
Hsap BLAST neighbor: P00488
Species: Homo sapiens

Structure of domain e1qrkB1

Domains in the same chain:

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e1qrkB1 B:10-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1qrkB5 B:191-507 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1qrkB2 B:516-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1qrkB3 B:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1qrkA1 A:9-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1qrkA5 A:191-511 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1qrkA6 A:516-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1qrkA3 A:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1qrkB1 B:10-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1qrkB5 B:191-507 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1qrkB2 B:516-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1qrkB3 B:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1qrkB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1qrkA6 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e1qrkA5 B:x,y,z->A:X,Y,Z Cysteine proteinases Interaction Interface Pymol
e1qrkA1 B:X-1,Y,Z->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1qrkA6 B:x,y,z->A:-X+1,Y-1/2,-Z Immunoglobulin-related Interaction Interface Pymol
e1qrkA3 B:-X+1,Y-1/2,-Z->A:x,y,z Immunoglobulin-related Interaction Interface Pymol