ECOD: domain e1qtmA4

Domain ID e1qtmA4

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: Taq-exonuc

UID:	000011140
Type:	Manual and representative domain
Range:	A:293-422
PDB:	1qtm
PDB Description:	DNA POLYMERASE I
UniProt:	P19821
Species:	Thermus aquaticus

Domains in the same chain:

Download Pymol

e1qtmA4	A:293-422	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1qtmA2	A:423-600	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e1qtmA3	A:601-624,A:749-830	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e1qtmA1	A:625-748	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e1qtmA4	A:293-422	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1qtmA2	A:423-600	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e1qtmA3	A:601-624,A:749-830	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e1qtmA1	A:625-748	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Structural contacts of domain e1qtmA4 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1qtmA2	A:x,y,z->A:X-Y,-Y+1,-Z-1/3	"fingers" domain in bacteriophage RB69-like DNA polymerase I	Interaction Interface Pymol
e1qtmA1	A:Y-1,X,-Z->A:x,y,z	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	Interaction Interface Pymol
e1qtmA3	A:-Y+1,X-Y+1,Z+1/3->A:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol