Domain ID e1r11A4

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  • A: a/b three-layered sandwiches
  • X: Restriction endonuclease-like
  • H: tRNA-intron endonuclease catalytic domain-like
  • T: tRNA-intron endonuclease catalytic domain-like
  • F: tRNA_int_endo
UID: 000114367
Type: Automatic domain
Parent: e1a79A2
Range: A:215-305
PDB: 1r11
PDB Description: tRNA-intron endonuclease
UniProt: O29362
Species:

Structure of domain e1r11A4

Domains in the same chain:

e1r11A2 A:3-60 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e1r11A3 A:62-139 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e1r11A1 A:140-214 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e1r11A4 A:215-305 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like

Domains in the same PDB:

e1r11A2 A:3-60 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e1r11A3 A:62-139 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e1r11A1 A:140-214 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e1r11A4 A:215-305 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e1r11B2 B:3-60 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e1r11B3 B:62-139 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like
e1r11B1 B:140-214 Homing endonucleases-like tRNA-intron endonuclease N-terminal domain-like tRNA-intron endonuclease N-terminal domain-like
e1r11B4 B:215-305 Restriction endonuclease-like tRNA-intron endonuclease catalytic domain-like tRNA-intron endonuclease catalytic domain-like

Structural contacts of domain e1r11A4 of H-group "tRNA-intron endonuclease catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1r11B4 A:X,Y,Z->B:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e1r11B3 A:X,Y,Z->B:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e1r11B3 A:x,y,z->B:X-1,Y,Z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e1r11B2 A:-X+1,Y-1/2,-Z->B:x,y,z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol