ECOD: domain e1r5bA1

Domain ID e1r5bA1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2

UID:	000000139
Type:	Manual and representative domain
Range:	A:460-554
PDB:	1r5b
PDB Description:	Eukaryotic peptide chain release factor GTP-binding subunit
UniProt:	O74718
Hsap BLAST neighbor:	P15170
Species:	Schizosaccharomyces pombe

Domain
In chain context
In PDB context

Structure of domain e1r5bA1

Domains in the same chain:

Download Pymol

e1r5bA6	A:236-279,A:308-463	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1r5bA1	A:460-554	cradle loop barrel	RIFT-related	Alanine racemase-C
e1r5bA2	A:555-662	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e1r5bA6	A:236-279,A:308-463	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1r5bA1	A:460-554	cradle loop barrel	RIFT-related	Alanine racemase-C
e1r5bA2	A:555-662	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Structural contacts of domain e1r5bA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1r5bA6	A:x,y,z->A:-Y,-X,-Z+1/2	P-loop domains-related	Interaction Interface Pymol
e1r5bA6	A:-Y,-X,-Z+1/2->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1r5bA2	A:x,y,z->A:-X+1/2,Y-1/2,-Z+3/4	RIFT-related	Interaction Interface Pymol
e1r5bA6	A:x,y,z->A:-Y+1/2,X+1/2,Z-1/4	P-loop domains-related	Interaction Interface Pymol
e1r5bA2	A:x,y,z->A:-Y+1/2,X-1/2,Z-1/4	RIFT-related	Interaction Interface Pymol