| UID: | 001167821 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2c78A3 |
| Range: | A:236-278,A:308-463 |
| Ligands: | GDP |
| PDB: | 1r5n |
| PDB Description: | EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP- BINDING SUBUNIT |
| UniProt: | O74718 |
| Hsap BLAST neighbor: | Q8IYD1 |
| Species: | Schizosaccharomyces pombe |
Structure of domain e1r5nA6
Domains in the same chain:
| e1r5nA5 | A:215-235,A:460-554 | cradle loop barrel | RIFT-related | Alanine racemase-C |
| e1r5nA6 | A:236-278,A:308-463 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e1r5nA4 | A:555-662 | cradle loop barrel | RIFT-related | Aminomethyltransferase beta-barrel domain |
Domains in the same PDB:
| e1r5nA5 | A:215-235,A:460-554 | cradle loop barrel | RIFT-related | Alanine racemase-C |
| e1r5nA6 | A:236-278,A:308-463 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e1r5nA4 | A:555-662 | cradle loop barrel | RIFT-related | Aminomethyltransferase beta-barrel domain |
Structural contacts of domain e1r5nA6 of H-group "P-loop domains-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1r5nA6 | A:x,y,z->A:Y+1,X-1,-Z+1 | P-loop domains-related | Interaction Interface Pymol |
| e1r5nA5 | A:x,y,z->A:Y+1,X-1,-Z+1 | RIFT-related | Interaction Interface Pymol |
| e1r5nA6 | A:Y+1,X-1,-Z+1->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e1r5nA5 | A:Y+1,X-1,-Z+1->A:x,y,z | RIFT-related | Interaction Interface Pymol |
| e1r5nA4 | A:x,y,z->A:-X+3/2,Y-1/2,-Z+3/4 | RIFT-related | Interaction Interface Pymol |
| e1r5nA5 | A:x,y,z->A:-Y+3/2,X-1/2,Z-1/4 | RIFT-related | Interaction Interface Pymol |
| e1r5nA4 | A:x,y,z->A:-Y+3/2,X-1/2,Z-1/4 | RIFT-related | Interaction Interface Pymol |
