ECOD: domain e1r89A3

Domain ID e1r89A3

A: a+b three layers
X: Nucleotidyltransferase-like
H: Nucleotidyltransferase
T: Nucleotidyltransferase
F: NTP_transf_2

UID:	000006816
Type:	Manual and representative domain
Range:	A:1-142
Ligands:	CL CTP MG MN
PDB:	1r89
PDB Description:	tRNA nucleotidyltransferase
UniProt:	O28126
Species:	Archaeoglobus fulgidus

Domains in the same chain:

Download Pymol

e1r89A3	A:1-142	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e1r89A1	A:143-257	HhH/H2TH	SAM/DNA-glycosylase	PAP/OAS1 substrate-binding domain
e1r89A2	A:258-437	Alpha-beta plaits	PAP/Archaeal CCA-adding enzyme, C-terminal domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain

Domains in the same PDB:

e1r89A3	A:1-142	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e1r89A1	A:143-257	HhH/H2TH	SAM/DNA-glycosylase	PAP/OAS1 substrate-binding domain
e1r89A2	A:258-437	Alpha-beta plaits	PAP/Archaeal CCA-adding enzyme, C-terminal domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain

Structural contacts of domain e1r89A3 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1r89A3	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	Nucleotidyltransferase	Interaction Interface Pymol
e1r89A2	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	PAP/Archaeal CCA-adding enzyme, C-terminal domain	Interaction Interface Pymol
e1r89A1	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol
e1r89A3	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	Nucleotidyltransferase	Interaction Interface Pymol
e1r89A2	A:x,y,z->A:X-1/2,Y+1/2,Z	PAP/Archaeal CCA-adding enzyme, C-terminal domain	Interaction Interface Pymol
e1r89A2	A:x,y,z->A:-X+1,Y,-Z+1	PAP/Archaeal CCA-adding enzyme, C-terminal domain	Interaction Interface Pymol
e1r89A2	A:-X+1,Y,-Z+1->A:x,y,z	PAP/Archaeal CCA-adding enzyme, C-terminal domain	Interaction Interface Pymol
e1r89A3	A:x,y,z->A:-X,Y,-Z+1	Nucleotidyltransferase	Interaction Interface Pymol
e1r89A3	A:-X,Y,-Z+1->A:x,y,z	Nucleotidyltransferase	Interaction Interface Pymol