ECOD: domain e1rfdH2

Domain ID e1rfdH2

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: C1-set

UID:	000036990
Type:	Automatic domain
Parent:	e1mjuH2
Range:	H:114-228
PDB:	1rfd
PDB Description:	FAB M82G2, HEAVY CHAIN
Hsap BLAST neighbor:	P01859
Species:	Mus musculus

Domain
In chain context
In PDB context

Structure of domain e1rfdH2

Domains in the same chain:

Download Pymol

e1rfdH1	H:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1rfdH2	H:114-228	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1rfdH1	H:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1rfdH2	H:114-228	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1rfdL1	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1rfdL2	L:108-213	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1rfdH2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1rfdL2	H:x,y,z->L:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e1rfdH1	H:-X+1,-X+Y,-Z+1/3->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1rfdH2	H:x,y,z->H:-X+2,-X+Y+1,-Z+1/3	Immunoglobulin-related	Interaction Interface Pymol
e1rfdH2	H:-X+2,-X+Y+1,-Z+1/3->H:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1rfdL2	H:X-Y,-Y+1,-Z+2/3->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1rfdL1	H:X-Y,-Y+1,-Z+2/3->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1rfdL1	H:-X+1,-X+Y,-Z+1/3->L:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1rfdL2	H:x,y,z->L:-X+2,-X+Y+1,-Z+1/3	Immunoglobulin-related	Interaction Interface Pymol
e1rfdH1	H:x,y,z->H:-Y+1,X-Y,Z+1/3	Immunoglobulin-related	Interaction Interface Pymol