| UID: | 000005675 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:70-98 |
| Ligands: | SO4 |
| PDB: | 1rki |
| PDB Description: | HYPOTHETICAL PROTEIN |
| UniProt: | Q8ZYK2 |
| Species: | Pyrobaculum aerophilum |
Structure of domain e1rkiA2
Domains in the same chain:
| e1rkiA1 | A:1-69 | Alpha-beta plaits | Ferredoxin-like domain in ThiI | Ferredoxin-like domain in ThiI |
| e1rkiA2 | A:70-98 | THUMP domain-like | THUMP domain-like | THUMP domain-like |
Domains in the same PDB:
Structural contacts of domain e1rkiA2 of H-group "THUMP domain-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1rkiB2 | A:X,Y,Z->B:x,y,z | THUMP domain-like | Interaction Interface Pymol |
| e1rkiA1 | A:x,y,z->A:-X,Y,-Z+1 | Ferredoxin-like domain in ThiI | Interaction Interface Pymol |
| e1rkiA1 | A:-X,Y,-Z+1->A:x,y,z | Ferredoxin-like domain in ThiI | Interaction Interface Pymol |
| e1rkiB1 | A:x,y,z->B:-X+1/2,Y-1/2,-Z+1 | Ferredoxin-like domain in ThiI | Interaction Interface Pymol |
| e1rkiB1 | A:X,Y,Z-1->B:x,y,z | Ferredoxin-like domain in ThiI | Interaction Interface Pymol |
| e1rkiB2 | A:-X+1/2,Y-1/2,-Z+1->B:x,y,z | THUMP domain-like | Interaction Interface Pymol |
