Domain ID e1rreD1

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Lon_C
UID: 000071574
Type: Automatic domain
Parent: e1rreA1
Range: D:594-695
Ligands: SO4
PDB: 1rre
PDB Description: ATP-dependent protease La
UniProt: P0A9M0
Hsap BLAST neighbor: Q86WA8
Species: Escherichia coli

Structure of domain e1rreD1

Domains in the same chain:

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e1rreD1 D:594-695 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1rreD2 D:696-774 C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains

Domains in the same PDB:

e1rreA1 A:594-696 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1rreA2 A:697-775 C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains
e1rreB1 B:594-695 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1rreB2 B:696-774 C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains
e1rreC1 C:594-695 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1rreC2 C:696-774 C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains
e1rreD1 D:594-695 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1rreD2 D:696-774 C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains
e1rreE1 E:594-695 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1rreE2 E:696-774 C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains
e1rreF1 F:594-695 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1rreF2 F:696-774 C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains C-terminal subdomain in Lon-related proteases catalytic domains

Structural contacts of domain e1rreD1 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rreC1 D:x,y,z->C:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1rreE1 D:X,Y,Z->E:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1rreE2 D:X,Y,Z->E:x,y,z C-terminal subdomain in Lon-related proteases catalytic domains Interaction Interface Pymol
e1rreB1 D:-Y+1,X-Y+1,Z+1/3->B:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1rreC1 D:-Y+1,X-Y+1,Z+1/3->C:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol