Domain ID e1rtjA7

Download files:
  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RVT_1
UID: 001256986
Type: Automatic domain
Parent: e1ztwA1
Range: A:1-240
PDB: 1rtj
PDB Description: HIV-1 REVERSE TRANSCRIPTASE
UniProt: P04585
Hsap BLAST neighbor: P63135
Species: Human immunodeficiency virus 1

Structure of domain e1rtjA7

Domains in the same chain:

e1rtjA7 A:1-240 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1rtjA6 A:241-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1rtjA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e1rtjA8 A:429-543 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e1rtjA7 A:1-240 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1rtjA6 A:241-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1rtjA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e1rtjA8 A:429-543 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1rtjB5 B:2-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1rtjB4 B:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1rtjB1 B:317-440 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e1rtjA7 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rtjB5 A:X,Y,Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1rtjA6 A:x,y,z->A:-X,Y-1/2,-Z+1/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1rtjA8 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Ribonuclease H-like Interaction Interface Pymol
e1rtjA5 A:x,y,z->A:-X,Y-1/2,-Z+1/2 RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e1rtjB5 A:-X+1/2,-Y-1,Z-1/2->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1rtjA5 A:X,Y,Z-1->A:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e1rtjB1 A:x,y,z->B:X-1/2,-Y-1/2,-Z+1 RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e1rtjA6 A:x,y,z->A:-X,Y-1/2,-Z+3/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1rtjB5 A:X,Y,Z-1->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol