Domain ID e1rvyB3

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  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: SHMT
UID: 001194081
Type: Automatic domain
Parent: e1kl1A2
Range: B:15-321
Ligands: PLG PLP PO4
PDB: 1rvy
PDB Description: Serine hydroxymethyltransferase, cytosolic
UniProt: P07511
Hsap BLAST neighbor: P34896
Species: Oryctolagus cuniculus

Structure of domain e1rvyB3

Structural contacts of domain e1rvyB3 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rvyA3 B:x,y,z->A:X,Y,Z PLP-dependent transferases Interaction Interface Pymol
e1rvyA2 B:x,y,z->A:X,Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1rvyB3 B:x,y,z->B:Y,X,-Z+1 PLP-dependent transferases Interaction Interface Pymol
e1rvyB3 B:Y,X,-Z+1->B:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1rvyA2 B:-Y+3/2,X+1/2,Z+1/4->A:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1rvyB3 B:x,y,z->B:-Y+1,-X+1,-Z+1/2 PLP-dependent transferases Interaction Interface Pymol
e1rvyB3 B:-Y+1,-X+1,-Z+1/2->B:x,y,z PLP-dependent transferases Interaction Interface Pymol