Domain ID e1rxsj1

Download files:
  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000264567
Type: Automatic domain
Parent: e3pnpA1
Range: j:2004-2253
Ligands: DUR K PO4 V7O
PDB: 1rxs
PDB Description: Uridine phosphorylase
UniProt: P12758
Hsap BLAST neighbor: O95045
Species: Escherichia coli

Structure of domain e1rxsj1

Domains in the same chain:

Download Pymol

e1rxsj1 j:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like

Domains in the same PDB:

e1rxsa1 a:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsA1 A:3004-3253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsb1 b:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsB1 B:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsc1 c:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsC1 C:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsd1 d:3004-3253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsD1 D:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxse1 e:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsE1 E:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsF1 F:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsG1 G:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsh1 h:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsH1 H:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsi1 i:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsI1 I:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsj1 j:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsJ1 J:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsk1 k:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsK1 K:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsl1 l:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsL1 L:3004-3253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsm1 m:3004-3253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsM1 M:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsN1 N:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxso1 o:3004-3253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsO1 O:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsP1 P:2004-2253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsQ1 Q:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxsR1 R:1004-1253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like

Structural contacts of domain e1rxsj1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rxsJ1 j:x,y,z->J:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxsK1 j:X,Y,Z->K:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxsa1 j:X-1,Y,Z-1->a:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxsk1 j:X,Y,Z->k:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxsl1 j:X,Y,Z->l:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxsA1 j:X-1,Y,Z-1->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol