Domain ID e1rxuJ1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000105999
Type: Automatic domain
Parent: e3pnpA1
Range: J:4-253
Ligands: K PO4 THM
PDB: 1rxu
PDB Description: Uridine phosphorylase
UniProt: P12758
Hsap BLAST neighbor: O95045
Species: Escherichia coli

Structure of domain e1rxuJ1

Domains in the same chain:

e1rxuJ1 J:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like

Domains in the same PDB:

e1rxuA1 A:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuB1 B:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuC1 C:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuD1 D:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuE1 E:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuF1 F:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuG1 G:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuH1 H:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuI1 I:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuJ1 J:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuK1 K:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuL1 L:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuM1 M:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuN1 N:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuO1 O:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuP1 P:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuQ1 Q:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like
e1rxuR1 R:4-253 Phosphorylase/hydrolase-like Peptidyl-tRNA hydrolase-like Peptidyl-tRNA hydrolase-like

Structural contacts of domain e1rxuJ1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rxuI1 J:x,y,z->I:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxuK1 J:X,Y,Z->K:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxuO1 J:-X+1,Y-1/2,-Z+1->O:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxuL1 J:X,Y,Z->L:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxuH1 J:x,y,z->H:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1rxuA1 J:x,y,z->A:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol