Domain ID e1rysA1

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: IMS_HHH
UID: 000048236
Type: Automatic domain
Parent: e1jx4A1
Range: A:177-239
PDB: 1rys
PDB Description: DNA polymerase IV
UniProt: Q97W02
Species: Sulfolobus solfataricus

Structure of domain e1rysA1

Domains in the same chain:

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e1rysA3 A:1-20,A:76-176 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1rysA4 A:21-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1rysA1 A:177-239 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1rysA2 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e1rysA3 A:1-20,A:76-176 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1rysA4 A:21-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1rysA1 A:177-239 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1rysA2 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e1rysB3 B:1-20,B:76-176 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1rysB4 B:21-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1rysB1 B:177-239 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1rysB2 B:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e1rysA1 of H-group "SAM/DNA-glycosylase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rysA2 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol
e1rysA4 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z Hypothetical protein Ta1206-like Interaction Interface Pymol