Domain ID e1s0oA3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: IMS
UID: 000065918
Type: Automatic domain
Parent: e1t3nA4
Range: A:1-20,A:76-176
Ligands: CA TTP
PDB: 1s0o
PDB Description: DNA polymerase IV
UniProt: Q97W02
Hsap BLAST neighbor: Q9UBZ9
Species:

Structure of domain e1s0oA3

Domains in the same chain:

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e1s0oA3 A:1-20,A:76-176 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1s0oA4 A:21-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1s0oA1 A:177-239 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1s0oA2 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e1s0oA3 A:1-20,A:76-176 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1s0oA4 A:21-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1s0oA1 A:177-239 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1s0oA2 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e1s0oB3 B:1-20,B:76-176 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1s0oB4 B:21-75 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1s0oB1 B:177-239 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1s0oB2 B:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e1s0oA3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1s0oA2 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol
e1s0oB3 A:X-1/2,-Y+1/2,-Z+1->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol