ECOD: domain e1s0uA4

Domain ID e1s0uA4

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	000133026
Type:	Automatic domain
Parent:	e2c78A3
Range:	A:34-82,A:111-227
PDB:	1s0u
PDB Description:	Translation initiation factor 2 gamma subunit
UniProt:	Q58657
Hsap BLAST neighbor:	Q2VIR3
Species:	Methanocaldococcus jannaschii

Domain
In chain context
In PDB context

Structure of domain e1s0uA4

Domains in the same chain:

Download Pymol

e1s0uA4	A:34-82,A:111-227	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1s0uA5	A:83-110	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1s0uA1	A:230-347	cradle loop barrel	RIFT-related	Alanine racemase-C
e1s0uA2	A:349-437	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e1s0uA4	A:34-82,A:111-227	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1s0uA5	A:83-110	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1s0uA1	A:230-347	cradle loop barrel	RIFT-related	Alanine racemase-C
e1s0uA2	A:349-437	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Structural contacts of domain e1s0uA4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1s0uA1	A:-X+2,Y-1/2,-Z+1->A:x,y,z	RIFT-related	Interaction Interface Pymol
e1s0uA4	A:x,y,z->A:-X+2,Y-1/2,-Z	P-loop domains-related	Interaction Interface Pymol
e1s0uA5	A:x,y,z->A:-X+2,Y-1/2,-Z	Rubredoxin-related	Interaction Interface Pymol
e1s0uA4	A:-X+2,Y-1/2,-Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol