Domain ID e1s1hE2

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 000266120
Type: Automatic domain
Parent: e1pkpA2
Range: E:144-222
PDB: 1s1h
PDB Description:
Hsap BLAST neighbor: P15880
Species:

Structure of domain e1s1hE2

Domains in the same chain:

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e1s1hE1 E:74-143 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1s1hE2 E:144-222 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e1s1hC3 C:5-98 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1s1hC1 C:91-192 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1s1hE1 E:74-143 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1s1hE2 E:144-222 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1s1hG1 G:75-224 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1s1hH1 H:3-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1s1hH2 H:67-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1s1hJ1 J:21-117 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1s1hK1 K:8-132 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1s1hL1 L:29-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1s1hO1 O:65-129 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1s1hT8 T:3-325 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1s1hT6 T:326-463 cradle loop barrel RIFT-related Alanine racemase-C
e1s1hT9 T:464-542 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1s1hT7 T:543-707,T:822-842 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1s1hT10 T:708-821 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e1s1hE2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1s1hH1 E:x,y,z->H:X,Y,Z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol
e1s1hH2 E:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol