ECOD: domain e1s2dA1

Domain ID e1s2dA1

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: N-deoxyribosyltransferase
T: N-deoxyribosyltransferase
F: Nuc_deoxyrib_tr

UID:	000010092
Type:	Manual and representative domain
Range:	A:1-167
Ligands:	ADE
PDB:	1s2d
PDB Description:	Nucleoside 2-deoxyribosyltransferase
UniProt:	Q8RLY5
Species:	Lactobacillus helveticus

Domains in the same chain:

Download Pymol

e1s2dA1	A:1-167	Flavodoxin-like	N-deoxyribosyltransferase	N-deoxyribosyltransferase

Domains in the same PDB:

e1s2dA1	A:1-167	Flavodoxin-like	N-deoxyribosyltransferase	N-deoxyribosyltransferase
e1s2dB1	B:1-167	Flavodoxin-like	N-deoxyribosyltransferase	N-deoxyribosyltransferase
e1s2dC1	C:1-167	Flavodoxin-like	N-deoxyribosyltransferase	N-deoxyribosyltransferase

Structural contacts of domain e1s2dA1 of H-group "N-deoxyribosyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1s2dC1	A:Y,X,-Z->C:x,y,z	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dB1	A:X,Y,Z->B:x,y,z	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dC1	A:X,Y,Z->C:x,y,z	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dB1	A:Y,X,-Z->B:x,y,z	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dA1	A:x,y,z->A:-X-1/2,Y-1/2,-Z-1/4	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dA1	A:-X-1/2,Y-1/2,-Z-1/4->A:x,y,z	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dB1	A:x,y,z->B:-X+1/2,Y-1/2,-Z-1/4	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dA1	A:x,y,z->A:Y,X,-Z	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dA1	A:Y,X,-Z->A:x,y,z	N-deoxyribosyltransferase	Interaction Interface Pymol
e1s2dB1	A:x,y,z->B:-X-1/2,Y-1/2,-Z-1/4	N-deoxyribosyltransferase	Interaction Interface Pymol