Domain ID e1s48A2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_3
UID: 000005366
Type: Manual and representative domain
Range: A:92-489
PDB: 1s48
PDB Description: RNA-DEPENDENT RNA POLYMERASE
UniProt: P19711
Species: Bovine viral diarrhea virus 1

Structure of domain e1s48A2

Structural contacts of domain e1s48A2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1s48A2 A:x,y,z->A:-X+1,-Y+2,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1s48A2 A:-X+1,-Y+2,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1s48A1 A:x,y,z->A:-X+Y,Y,-Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1s48A2 A:x,y,z->A:-X+Y,Y,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1s48A1 A:-X+Y,Y,-Z->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1s48A2 A:-X+Y,Y,-Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1s48A1 A:x,y,z->A:-Y+1,X-Y+1,Z-1/3 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1s48A1 A:x,y,z->A:-X+Y,Y,-Z+1 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1s48A1 A:-X+Y,Y,-Z+1->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1s48A2 A:x,y,z->A:-Y+1,-X+1,-Z+2/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1s48A2 A:-Y+1,-X+1,-Z+2/3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol