Domain ID e1sd2A1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000106080
Type: Automatic domain
Parent: e3pnpA1
Range: A:9-281
Ligands: MTH SO4
DrugDomain: DB02933
PDB: 1sd2
PDB Description: 5'-methylthioadenosine phosphorylase
UniProt: Q13126
Hsap BLAST neighbor: Q13126
Species: Homo sapiens

Structure of domain e1sd2A1

Structural contacts of domain e1sd2A1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1sd2A1 A:x,y,z->A:-Y+1,X-Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1sd2A1 A:-Y+1,X-Y,Z->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1sd2A1 A:x,y,z->A:X-Y,-Y,-Z+1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1sd2A1 A:X-Y,-Y,-Z+1->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1sd2A1 A:x,y,z->A:X-Y,-Y,-Z+2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1sd2A1 A:X-Y,-Y,-Z+2->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1sd2A1 A:x,y,z->A:X,Y,Z-1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1sd2A1 A:X,Y,Z-1->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol