Domain ID e1sd3B2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001522545
Type: Automatic domain
Parent: e1mqiA3
Range: B:3-108,B:216-253
Ligands: SYM
PDB: 1sd3
PDB Description: Glutamate receptor, ionotropic kainate 2
UniProt: P42260
Hsap BLAST neighbor: Q13002
Species: Rattus norvegicus

Structure of domain e1sd3B2

Structural contacts of domain e1sd3B2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1sd3B2 B:x,y,z->B:X-1/2,-Y+1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e1sd3B2 B:X-1/2,-Y+1/2,-Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1sd3B2 B:X-1/2,-Y+1/2,-Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1sd3B2 B:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e1sd3A2 B:x,y,z->A:-X+1/2,-Y,Z-1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e1sd3A2 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e1sd3A2 B:x,y,z->A:X-1/2,-Y+1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e1sd3A2 B:-X+1,Y-1/2,-Z+1/2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol