Domain ID e1sebA1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000038748
Type: Automatic domain
Parent: e1k5nB1
Range: A:82-180
PDB: 1seb
PDB Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN
UniProt: P01903
Hsap BLAST neighbor: P01903
Species: Homo sapiens

Structure of domain e1sebA1

Domains in the same chain:

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e1sebA2 A:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1sebA1 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1sebA2 A:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1sebA1 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1sebB2 B:1-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1sebB1 B:95-191 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1sebD1 D:2-121 OB-fold Bacterial enterotoxins Bacterial enterotoxins
e1sebD2 D:127-235 beta-Grasp Ubiquitin-related Ubiquitin-like
e1sebE2 E:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1sebE1 E:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1sebF2 F:1-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1sebF1 F:95-191 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1sebH1 H:2-121 OB-fold Bacterial enterotoxins Bacterial enterotoxins
e1sebH2 H:127-235 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e1sebA1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1sebB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1sebB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1sebF1 A:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1sebF1 A:X-1/2,-Y+1/2,-Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1sebE1 A:X,Y,Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol