| UID: | 000079446 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1qf6A3 |
| Range: | B:111-421 |
| Ligands: | AMP |
| PDB: | 1ses |
| PDB Description: | SERYL-tRNA SYNTHETASE |
| UniProt: | P34945 |
| Hsap BLAST neighbor: | Q9NP81 |
| Species: | Thermus thermophilus |
Structure of domain e1sesB2
Domains in the same chain:
| e1sesB1 | B:1-110 | Long alpha-hairpin | tRNA-binding arm | tRNA-binding arm |
| e1sesB2 | B:111-421 | Class II aaRS and biotin synthetases | Class II aaRS and biotin synthetases | Class II aaRS and biotin synthetases |
Domains in the same PDB:
Structural contacts of domain e1sesB2 of H-group "Class II aaRS and biotin synthetases":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1sesA2 | B:x,y,z->A:X,Y,Z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e1sesA1 | B:x,y,z->A:-X+1,Y-1/2,-Z+2 | tRNA-binding arm | Interaction Interface Pymol |
| e1sesA2 | B:x,y,z->A:-X+2,Y-1/2,-Z+2 | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e1sesB2 | B:x,y,z->B:X,Y,Z-1 | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e1sesB2 | B:X,Y,Z-1->B:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
