Domain ID e1seuA6

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: DNA breaking-rejoining enzymes
  • F: Topoisom_I,Topo_C_assoc
UID: 001761958
Type: Automatic domain
Parent: e1k4tA3
Range: A:585-644,A:717-765
Ligands: SA3
PDB: 1seu
PDB Description: DNA topoisomerase I
UniProt: P11387
Hsap BLAST neighbor: P11387
Species: Homo sapiens

Structure of domain e1seuA6

Domains in the same chain:

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e1seuA1 A:213-229,A:320-430 Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1seuA4 A:230-318 Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1seuA2 A:431-583 HTH HTH DNA breaking-rejoining enzymes
e1seuA6 A:585-644,A:717-765 HTH HTH DNA breaking-rejoining enzymes
e1seuA5 A:641-712 Long alpha-hairpin Eukaryotic DNA topoisomerase I, dispensable insert domain Eukaryotic DNA topoisomerase I, dispensable insert domain

Domains in the same PDB:

e1seuA1 A:213-229,A:320-430 Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1seuA4 A:230-318 Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
e1seuA2 A:431-583 HTH HTH DNA breaking-rejoining enzymes
e1seuA6 A:585-644,A:717-765 HTH HTH DNA breaking-rejoining enzymes
e1seuA5 A:641-712 Long alpha-hairpin Eukaryotic DNA topoisomerase I, dispensable insert domain Eukaryotic DNA topoisomerase I, dispensable insert domain

Structural contacts of domain e1seuA6 of H-group "HTH":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1seuA4 A:-X+1,Y-1/2,-Z+1->A:x,y,z Alpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Interaction Interface Pymol
e1seuA1 A:-X+1,Y-1/2,-Z+1->A:x,y,z Beta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Interaction Interface Pymol