ECOD: domain e1skrB1

Domain ID e1skrB1

A: a+b three layers
X: Thioredoxin-like
H: Thioredoxin-like
T: Thioredoxin-like
F: Thioredoxin

UID:	000116130
Type:	Automatic domain
Parent:	e1thxA1
Range:	B:3-107
PDB:	1skr
PDB Description:	Thioredoxin 1
UniProt:	P0AA25
Hsap BLAST neighbor:	Q99757
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1skrB1

Domains in the same chain:

Download Pymol

e1skrB1	B:3-107	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like

Domains in the same PDB:

e1skrA4	A:1-210	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1skrA2	A:211-462	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e1skrA3	A:463-490,A:614-703	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e1skrA1	A:491-613	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I
e1skrB1	B:3-107	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like

Structural contacts of domain e1skrB1 of H-group "Thioredoxin-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1skrA2	B:x,y,z->A:X,Y,Z	"fingers" domain in bacteriophage RB69-like DNA polymerase I	Interaction Interface Pymol
e1skrA4	B:x,y,z->A:X-1/2,-Y+1/2,-Z	Ribonuclease H-like	Interaction Interface Pymol
e1skrA4	B:x,y,z->A:X-1/2,-Y+1/2,-Z+1	Ribonuclease H-like	Interaction Interface Pymol