Domain ID e1smkD1

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  • A: a+b complex topology
  • X: LDH C-terminal domain-like
  • H: LDH C-terminal domain-like
  • T: LDH C-terminal domain-like
  • F: Ldh_1_C
UID: 001853450
Type: Automatic domain
Parent: e2cmdA1
Range: D:189-356
PDB: 1smk
PDB Description: Malate dehydrogenase, glyoxysomal
UniProt: P19446
Hsap BLAST neighbor: P40926
Species: Citrullus lanatus

Structure of domain e1smkD1

Domains in the same chain:

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e1smkD2 D:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkD1 D:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like

Domains in the same PDB:

e1smkA2 A:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkA3 A:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e1smkB2 B:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkB1 B:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e1smkC2 C:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkC3 C:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e1smkD2 D:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkD1 D:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e1smkE2 E:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkE1 E:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e1smkF2 F:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkF3 F:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e1smkG2 G:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkG3 G:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like
e1smkH2 H:44-188 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1smkH3 H:189-356 LDH C-terminal domain-like LDH C-terminal domain-like LDH C-terminal domain-like

Structural contacts of domain e1smkD1 of H-group "LDH C-terminal domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1smkC2 D:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol
e1smkF2 D:-X+1,Y-1/2,-Z+1->F:x,y,z Rossmann-related Interaction Interface Pymol
e1smkF3 D:-X+1,Y-1/2,-Z+1->F:x,y,z LDH C-terminal domain-like Interaction Interface Pymol
e1smkF3 D:X,Y-1,Z->F:x,y,z LDH C-terminal domain-like Interaction Interface Pymol
e1smkE2 D:-X+1,Y-1/2,-Z+1->E:x,y,z Rossmann-related Interaction Interface Pymol