ECOD: domain e1svbA2

Domain ID e1svbA2

A: beta complex topology
X: Viral glycoprotein, central and dimerisation domains-like
H: Viral glycoprotein, central and dimerisation domains
T: Viral glycoprotein, central and dimerisation domains
F: Flavi_glycoprot

UID:	000002343
Type:	Manual and representative domain
Range:	A:1-302
Ligands:	NAG
PDB:	1svb
PDB Description:	TICK-BORNE ENCEPHALITIS VIRUS GLYCOPROTEIN
UniProt:	P14336
Species:	Tick-borne encephalitis virus

Domains in the same chain:

Download Pymol

e1svbA2	A:1-302	Viral glycoprotein, central and dimerisation domains-like	Viral glycoprotein, central and dimerisation domains	Viral glycoprotein, central and dimerisation domains
e1svbA1	A:303-395	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1svbA2	A:1-302	Viral glycoprotein, central and dimerisation domains-like	Viral glycoprotein, central and dimerisation domains	Viral glycoprotein, central and dimerisation domains
e1svbA1	A:303-395	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1svbA2 of H-group "Viral glycoprotein, central and dimerisation domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1svbA2	A:x,y,z->A:Y,X,-Z+1/3	Viral glycoprotein, central and dimerisation domains	Interaction Interface Pymol
e1svbA1	A:x,y,z->A:Y,X,-Z+1/3	Immunoglobulin-related	Interaction Interface Pymol
e1svbA1	A:Y,X,-Z+1/3->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1svbA2	A:Y,X,-Z+1/3->A:x,y,z	Viral glycoprotein, central and dimerisation domains	Interaction Interface Pymol
e1svbA2	A:x,y,z->A:-X+Y,Y,-Z+1/2	Viral glycoprotein, central and dimerisation domains	Interaction Interface Pymol
e1svbA2	A:-X+Y,Y,-Z+1/2->A:x,y,z	Viral glycoprotein, central and dimerisation domains	Interaction Interface Pymol
e1svbA2	A:x,y,z->A:X,X-Y+1,-Z+1/6	Viral glycoprotein, central and dimerisation domains	Interaction Interface Pymol
e1svbA2	A:X,X-Y+1,-Z+1/6->A:x,y,z	Viral glycoprotein, central and dimerisation domains	Interaction Interface Pymol
e1svbA1	A:X-Y,X,Z-5/6->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1svbA1	A:x,y,z->A:-Y+1,X-Y+1,Z+1/3	Immunoglobulin-related	Interaction Interface Pymol
e1svbA2	A:x,y,z->A:-Y+1,X-Y+1,Z+1/3	Viral glycoprotein, central and dimerisation domains	Interaction Interface Pymol
e1svbA2	A:-Y+1,X-Y+1,Z+1/3->A:x,y,z	Viral glycoprotein, central and dimerisation domains	Interaction Interface Pymol