Domain ID e1t94B3

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: IMS_HHH
UID: 001599741
Type: Automatic domain
Parent: e2oh2A3
Range: B:346-405
PDB: 1t94
PDB Description: polymerase (DNA directed) kappa
UniProt: Q9UBT6
Hsap BLAST neighbor: Q9UBT6
Species: Homo sapiens

Structure of domain e1t94B3

Domains in the same chain:

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e1t94B1 B:75-121,B:170-224,B:282-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1t94B2 B:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1t94B3 B:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1t94B4 B:406-517 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e1t94A3 A:75-121,A:170-253,A:276-348 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1t94A4 A:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1t94A1 A:349-407 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1t94A2 A:411,A:414-515 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e1t94B1 B:75-121,B:170-224,B:282-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1t94B2 B:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e1t94B3 B:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1t94B4 B:406-517 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e1t94B3 of H-group "SAM/DNA-glycosylase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1t94A1 B:x,y,z->A:X-1/2,-Y+1/2,-Z+2 SAM/DNA-glycosylase Interaction Interface Pymol
e1t94A2 B:-X-1/2,-Y+1,Z-1/2->A:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol
e1t94A4 B:X,Y,Z-1->A:x,y,z Hypothetical protein Ta1206-like Interaction Interface Pymol