Domain ID e1t9kD2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NagB/RpiA/CoA transferase-like
  • F: IF-2B
UID: 001150265
Type: Automatic domain
Parent: e1t5oA1
Range: D:132-342
Ligands: SO4
PDB: 1t9k
PDB Description: Probable methylthioribose-1-phosphate isomerase
UniProt: Q9X013
Hsap BLAST neighbor: Q9BV20
Species: Thermotoga maritima

Structure of domain e1t9kD2

Domains in the same chain:

e1t9kD3 D:1-131 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1t9kD2 D:132-342 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like

Domains in the same PDB:

e1t9kA3 A:3-131 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1t9kA2 A:132-342 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like
e1t9kB3 B:3-131 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1t9kB2 B:132-342 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like
e1t9kC3 C:1-131 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1t9kC2 C:132-342 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like
e1t9kD3 D:1-131 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1t9kD2 D:132-342 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like

Structural contacts of domain e1t9kD2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1t9kC3 D:x,y,z->C:X,Y,Z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e1t9kC2 D:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol
e1t9kA3 D:x,y,z->A:X-Y+1,-Y+2,-Z+2/3 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e1t9kB2 D:X-1,Y-1,Z->B:x,y,z Rossmann-related Interaction Interface Pymol
e1t9kC2 D:x,y,z->C:X-Y+1,-Y+2,-Z+2/3 Rossmann-related Interaction Interface Pymol
e1t9kC3 D:x,y,z->C:X-Y+1,-Y+2,-Z+2/3 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e1t9kC2 D:x,y,z->C:Y,X,-Z+1 Rossmann-related Interaction Interface Pymol