ECOD: domain e1tdqB1

Domain ID e1tdqB1

A: a+b complex topology
X: C-type lectin-like
H: C-type lectin-like
T: C-type lectin-like
F: Lectin_C

UID:	000007348
Type:	Manual and representative domain
Range:	B:1-126
Ligands:	CA
PDB:	1tdq
PDB Description:	Aggrecan core protein
UniProt:	P07897
Hsap BLAST neighbor:	P16112
Species:	Rattus norvegicus

Domains in the same chain:

Download Pymol

e1tdqB1	B:1-126	C-type lectin-like	C-type lectin-like	C-type lectin-like

Domains in the same PDB:

e1tdqA1	A:3-92	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1tdqA2	A:94-185	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1tdqA3	A:186-271	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1tdqB1	B:1-126	C-type lectin-like	C-type lectin-like	C-type lectin-like

Structural contacts of domain e1tdqB1 of H-group "C-type lectin-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1tdqA2	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e1tdqA3	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e1tdqA1	B:X,Y,Z-1->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1tdqA1	B:-X+1/2,Y-1/2,-Z+3->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol