Domain ID e1tfwD1

Download files:
  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: PAP/OAS1 substrate-binding domain
  • F: tRNA_NucTransf2
UID: 000048378
Type: Automatic domain
Parent: e1r89A1
Range: D:143-257
Ligands: ATP
PDB: 1tfw
PDB Description: TRNA NUCLEOTIDYLTRANSFERASE
UniProt: O28126
Species: Archaeoglobus fulgidus

Structure of domain e1tfwD1

Domains in the same chain:

e1tfwD3 D:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfwD1 D:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfwD2 D:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain

Domains in the same PDB:

e1tfwA3 A:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfwA1 A:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfwA2 A:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e1tfwB3 B:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfwB1 B:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfwB2 B:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e1tfwC3 C:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfwC1 C:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfwC2 C:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e1tfwD3 D:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfwD1 D:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfwD2 D:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain

Structural contacts of domain e1tfwD1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1tfwC2 D:x,y,z->C:X,Y,Z PAP/Archaeal CCA-adding enzyme, C-terminal domain Interaction Interface Pymol
e1tfwB3 D:x,y,z->B:X,Y,Z-1 Nucleotidyltransferase Interaction Interface Pymol
e1tfwA3 D:x,y,z->A:X,Y,Z Nucleotidyltransferase Interaction Interface Pymol