Domain ID e1tfyB1

Download files:
  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: PAP/OAS1 substrate-binding domain
  • F: tRNA_NucTransf2
UID: 000048381
Type: Automatic domain
Parent: e1r89A1
Range: B:143-257
Ligands: CTP
PDB: 1tfy
PDB Description: TRNA NUCLEOTIDYLTRANSFERASE
UniProt: O28126
Species: Archaeoglobus fulgidus

Structure of domain e1tfyB1

Domains in the same chain:

e1tfyB3 B:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfyB1 B:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfyB2 B:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain

Domains in the same PDB:

e1tfyA3 A:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfyA1 A:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfyA2 A:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e1tfyB3 B:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfyB1 B:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfyB2 B:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e1tfyC3 C:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfyC1 C:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfyC2 C:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e1tfyD3 D:1-142 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e1tfyD1 D:143-257 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e1tfyD2 D:258-437 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain

Structural contacts of domain e1tfyB1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1tfyA2 B:x,y,z->A:X,Y,Z PAP/Archaeal CCA-adding enzyme, C-terminal domain Interaction Interface Pymol
e1tfyD3 B:X,Y,Z-1->D:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e1tfyC3 B:X,Y,Z->C:x,y,z Nucleotidyltransferase Interaction Interface Pymol