Domain ID e1tgvB1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000106004
Type: Automatic domain
Parent: e3pnpA1
Range: B:4-253
Ligands: 5UD K SO4
PDB: 1tgv
PDB Description: uridine phosphorylase
UniProt: P12758
Hsap BLAST neighbor: O95045
Species: Escherichia coli

Structure of domain e1tgvB1

Structural contacts of domain e1tgvB1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1tgvA1 B:x,y,z->A:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1tgvA1 B:-Y+1,X-Y,Z->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1tgvB1 B:x,y,z->B:-Y+2/3,X-Y+1/3,Z+1/3 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1tgvB1 B:-Y+2/3,X-Y+1/3,Z+1/3->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1tgvB1 B:x,y,z->B:-Y+1,X-Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1tgvB1 B:-Y+1,X-Y,Z->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1tgvA1 B:X,Y,Z-1->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol