Domain ID e1tk8A7

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: RNase_H_2
UID: 001168775
Type: Automatic domain
Parent: e1x9mA4
Range: A:1-210
Ligands: 1PE MES MG SO4
PDB: 1tk8
PDB Description: DNA POLYMERASE
UniProt: P00581
Species: Enterobacteria phage T7

Structure of domain e1tk8A7

Structural contacts of domain e1tk8A7 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1tk8A8 A:X,Y,Z-1->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1tk8A8 A:x,y,z->A:-X+1,-Y+2,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1tk8A1 A:x,y,z->A:-X+1,-Y+2,Z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e1tk8A8 A:-X+1,-Y+2,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1tk8A1 A:-X+1,-Y+2,Z->A:x,y,z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e1tk8A6 A:x,y,z->A:X-1/2,-Y+3/2,-Z+2 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1tk8A6 A:x,y,z->A:X-1/2,-Y+3/2,-Z+1 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1tk8B1 A:x,y,z->B:X-1/2,-Y+3/2,-Z+1 Thioredoxin-like Interaction Interface Pymol