ECOD: domain e1u2rA5

Domain ID e1u2rA5

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	000101604
Type:	Automatic domain
Parent:	e2c78A3
Range:	A:3-343
Ligands:	GDP MG
PDB:	1u2r
PDB Description:	ELONGATION FACTOR 2
UniProt:	P32324
Hsap BLAST neighbor:	P13639
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e1u2rA5

Domains in the same chain:

Download Pymol

Domains in the same PDB:

Structural contacts of domain e1u2rA5 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1u2rA4	A:x,y,z->A:X,Y,Z-1	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1u2rA2	A:x,y,z->A:-X+3/2,Y-1/2,-Z	EF-G C-terminal domain-like	Interaction Interface Pymol
e1u2rA4	A:x,y,z->A:-X+3/2,Y-1/2,-Z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1u2rA1	A:X-1/2,-Y+1/2,-Z-1->A:x,y,z	RIFT-related	Interaction Interface Pymol

e1u2rA5	A:3-343	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1u2rA1	A:344-481	cradle loop barrel	RIFT-related	Alanine racemase-C
e1u2rA2	A:482-560	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e1u2rA4	A:561-725	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1u2rA3	A:726-842	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like