ECOD: domain e1u3dA1

Domain ID e1u3dA1

A: alpha complex topology
X: Cryptochrome/photolyase FAD-binding domain-related
H: Cryptochrome/photolyase FAD-binding domain-related
T: Cryptochrome/photolyase FAD-binding domain
F: FAD_binding_7

UID:	000004829
Type:	Manual and representative domain
Range:	A:198-497
Ligands:	ANP CL FAD MG NDS
PDB:	1u3d
PDB Description:	CRYPTOCHROME 1 APOPROTEIN
UniProt:	Q43125
Hsap BLAST neighbor:	Q16526
Species:	Arabidopsis thaliana

Domains in the same chain:

Download Pymol

e1u3dA2	A:13-197	HUP domain-like	HUP domains	HUP domains
e1u3dA1	A:198-497	Cryptochrome/photolyase FAD-binding domain-related	Cryptochrome/photolyase FAD-binding domain-related	Cryptochrome/photolyase FAD-binding domain

Domains in the same PDB:

e1u3dA2	A:13-197	HUP domain-like	HUP domains	HUP domains
e1u3dA1	A:198-497	Cryptochrome/photolyase FAD-binding domain-related	Cryptochrome/photolyase FAD-binding domain-related	Cryptochrome/photolyase FAD-binding domain

Structural contacts of domain e1u3dA1 of H-group "Cryptochrome/photolyase FAD-binding domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1u3dA1	A:x,y,z->A:-X+Y+1,Y,-Z+3/2	Cryptochrome/photolyase FAD-binding domain-related	Interaction Interface Pymol
e1u3dA2	A:x,y,z->A:-X+Y+1,Y,-Z+3/2	HUP domains	Interaction Interface Pymol
e1u3dA1	A:-X+Y+1,Y,-Z+3/2->A:x,y,z	Cryptochrome/photolyase FAD-binding domain-related	Interaction Interface Pymol
e1u3dA2	A:-X+Y+1,Y,-Z+3/2->A:x,y,z	HUP domains	Interaction Interface Pymol
e1u3dA1	A:x,y,z->A:-Y,-X,-Z+3/2	Cryptochrome/photolyase FAD-binding domain-related	Interaction Interface Pymol
e1u3dA1	A:-Y,-X,-Z+3/2->A:x,y,z	Cryptochrome/photolyase FAD-binding domain-related	Interaction Interface Pymol
e1u3dA2	A:x,y,z->A:X-Y,-Y,-Z+2	HUP domains	Interaction Interface Pymol
e1u3dA2	A:X-Y,-Y,-Z+2->A:x,y,z	HUP domains	Interaction Interface Pymol
e1u3dA1	A:x,y,z->A:X-Y,-Y,-Z+1	Cryptochrome/photolyase FAD-binding domain-related	Interaction Interface Pymol
e1u3dA1	A:X-Y,-Y,-Z+1->A:x,y,z	Cryptochrome/photolyase FAD-binding domain-related	Interaction Interface Pymol