| UID: | 001199035 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1df0A1 |
| Range: | A:355-516 |
| PDB: | 1u5i |
| PDB Description: | Calpain 2, large [catalytic] subunit precursor |
| UniProt: | Q07009 |
| Hsap BLAST neighbor: | P17655 |
| Species: | Rattus norvegicus |
Structure of domain e1u5iA7
Domains in the same chain:
| e1u5iA5 | A:24-290,A:322-354 | Cysteine proteinases-like | Cysteine proteinases | Cysteine proteinases |
| e1u5iA7 | A:355-516 | jelly-roll | Galactose-binding domain-like | Galactose-binding domain-like |
| e1u5iA6 | A:517-605 | EF-hand | EF-hand-related | EF-hand |
| e1u5iA2 | A:606-700 | EF-hand | EF-hand-related | EF-hand |
Domains in the same PDB:
| e1u5iA5 | A:24-290,A:322-354 | Cysteine proteinases-like | Cysteine proteinases | Cysteine proteinases |
| e1u5iA7 | A:355-516 | jelly-roll | Galactose-binding domain-like | Galactose-binding domain-like |
| e1u5iA6 | A:517-605 | EF-hand | EF-hand-related | EF-hand |
| e1u5iA2 | A:606-700 | EF-hand | EF-hand-related | EF-hand |
| e1u5iB2 | B:12-88 | EF-hand | EF-hand-related | EF-hand |
| e1u5iB3 | B:89-184 | EF-hand | EF-hand-related | EF-hand |
Structural contacts of domain e1u5iA7 of H-group "Galactose-binding domain-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1u5iB2 | A:X,Y,Z->B:x,y,z | EF-hand-related | Interaction Interface Pymol |
| e1u5iB3 | A:X,Y,Z->B:x,y,z | EF-hand-related | Interaction Interface Pymol |
| e1u5iA5 | A:X-1,Y,Z->A:x,y,z | Cysteine proteinases | Interaction Interface Pymol |
| e1u5iA5 | A:x,y,z->A:X,Y,Z-1 | Cysteine proteinases | Interaction Interface Pymol |
| e1u5iB3 | A:X-1,Y,Z->B:x,y,z | EF-hand-related | Interaction Interface Pymol |
| e1u5iA6 | A:-X+1,Y-1/2,-Z->A:x,y,z | EF-hand-related | Interaction Interface Pymol |
