Domain ID e1u8cA1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: Integrin_A_Ig_1
UID: 000039235
Type: Automatic domain
Parent: e1jv2A1
Range: A:439-598
Ligands: CA NAG NDG
PDB: 1u8c
PDB Description: INTEGRIN ALPHA-V
UniProt: P06756
Hsap BLAST neighbor: P06756
Species: Homo sapiens

Structure of domain e1u8cA1

Domains in the same chain:

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e1u8cA4 A:1-438 beta-propeller-like beta-propeller 7-bladed
e1u8cA1 A:439-598 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1u8cA2 A:599-737 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1u8cA3 A:738-838,A:868-956 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1u8cA4 A:1-438 beta-propeller-like beta-propeller 7-bladed
e1u8cA1 A:439-598 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1u8cA2 A:599-737 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1u8cA3 A:738-838,A:868-956 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1u8cB3 B:1001-1058 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e1u8cB6 B:1059-1109,B:1358-1434,B:1523-1527 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1u8cB1 B:1107-1357 HAD domain-like HAD domain-related vWA-like
e1u8cB5 B:1528-1562 EGF-like EGF-related EGF/Laminin
e1u8cB4 B:1563-1605 EGF-like EGF-related EGF/Laminin
e1u8cB2 B:1606-1690 Integrin beta tail domain Integrin beta tail domain Integrin beta tail domain

Structural contacts of domain e1u8cA1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1u8cA4 A:x,y,z->A:Y-1,X,-Z beta-propeller Interaction Interface Pymol
e1u8cB3 A:Y-1,X,-Z->B:x,y,z Trefoil/Plexin domain-like Interaction Interface Pymol