Domain ID e1u8vD3

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  • A: alpha bundles
  • X: Bromodomain-like
  • H: Acyl-CoA dehydrogenase C-terminal domain-like
  • T: Acyl-CoA dehydrogenase C-terminal domain-like
  • F: HpaB
UID: 000054169
Type: Automatic domain
Parent: e1u8vA3
Range: D:276-490
Ligands: FAD SF4
PDB: 1u8v
PDB Description: Gamma-aminobutyrate metabolism dehydratase/isomerase
UniProt: P55792
Species: Clostridium aminobutyricum

Structure of domain e1u8vD3

Domains in the same chain:

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e1u8vD2 D:1-141 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1u8vD1 D:142-274 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1u8vD3 D:276-490 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Domains in the same PDB:

e1u8vA2 A:1-142 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1u8vA1 A:143-275 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1u8vA3 A:276-490 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e1u8vB2 B:1-141 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1u8vB1 B:142-274 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1u8vB3 B:276-490 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e1u8vC2 C:1-141 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1u8vC1 C:142-274 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1u8vC3 C:276-490 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e1u8vD2 D:1-141 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1u8vD1 D:142-274 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1u8vD3 D:276-490 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Structural contacts of domain e1u8vD3 of H-group "Acyl-CoA dehydrogenase C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1u8vC2 D:x,y,z->C:X,Y,Z Acyl-CoA dehydrogenase N-terminal domain-like Interaction Interface Pymol
e1u8vC1 D:x,y,z->C:X,Y,Z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e1u8vC3 D:x,y,z->C:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e1u8vB2 D:x,y,z->B:X,Y,Z Acyl-CoA dehydrogenase N-terminal domain-like Interaction Interface Pymol
e1u8vB1 D:x,y,z->B:X,Y,Z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e1u8vB3 D:x,y,z->B:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e1u8vA3 D:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e1u8vB1 D:-X+2,Y-1/2,-Z+1/2->B:x,y,z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e1u8vA3 D:x,y,z->A:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol