Domain ID e1ub0A1

Download files:
  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Ribokinase-like
  • T: Ribokinase-like
  • F: Phos_pyr_kin
UID: 000009511
Type: Manual and representative domain
Range: A:1-258
Ligands: DIO GOL SO4
PDB: 1ub0
PDB Description: PHOSPHOMETHYLPYRIMIDINE KINASE
UniProt: Q7SIA0
Hsap BLAST neighbor: O00764
Species: Thermus thermophilus

Structure of domain e1ub0A1

Domains in the same chain:

e1ub0A1 A:1-258 Rossmann-like Ribokinase-like Ribokinase-like

Domains in the same PDB:

e1ub0A1 A:1-258 Rossmann-like Ribokinase-like Ribokinase-like

Structural contacts of domain e1ub0A1 of H-group "Ribokinase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ub0A1 A:x,y,z->A:X-Y+1,-Y+2,-Z Ribokinase-like Interaction Interface Pymol
e1ub0A1 A:X-Y+1,-Y+2,-Z->A:x,y,z Ribokinase-like Interaction Interface Pymol
e1ub0A1 A:x,y,z->A:-X+Y,Y,-Z+1/2 Ribokinase-like Interaction Interface Pymol
e1ub0A1 A:-X+Y,Y,-Z+1/2->A:x,y,z Ribokinase-like Interaction Interface Pymol
e1ub0A1 A:x,y,z->A:X,X-Y+2,-Z-1/6 Ribokinase-like Interaction Interface Pymol
e1ub0A1 A:X,X-Y+2,-Z-1/6->A:x,y,z Ribokinase-like Interaction Interface Pymol
e1ub0A1 A:x,y,z->A:X-Y+1,X+1,Z-1/6 Ribokinase-like Interaction Interface Pymol
e1ub0A1 A:X-Y+1,X+1,Z-1/6->A:x,y,z Ribokinase-like Interaction Interface Pymol