Domain ID e1udyC3

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  • A: alpha bundles
  • X: Bromodomain-like
  • H: Acyl-CoA dehydrogenase C-terminal domain-like
  • T: Acyl-CoA dehydrogenase C-terminal domain-like
  • F: Acyl-CoA_dh_1
UID: 000054189
Type: Automatic domain
Parent: e1ivhA3
Range: C:242-394
Ligands: CS8 FAD
PDB: 1udy
PDB Description: ACYL-COA DEHYDROGENASE, MEDIUM-CHAIN SPECIFIC
UniProt: P41367
Hsap BLAST neighbor: P11310
Species: Sus scrofa

Structure of domain e1udyC3

Domains in the same chain:

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e1udyC2 C:12-127 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1udyC1 C:128-240 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1udyC3 C:242-394 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Domains in the same PDB:

e1udyA2 A:12-127 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1udyA1 A:128-240 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1udyA3 A:242-394 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e1udyB2 B:12-127 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1udyB1 B:128-240 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1udyB3 B:242-393 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e1udyC2 C:12-127 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1udyC1 C:128-240 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1udyC3 C:242-394 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like
e1udyD2 D:12-127 Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like Acyl-CoA dehydrogenase N-terminal domain-like
e1udyD1 D:128-240 Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like Acyl-CoA dehydrogenase middle domain-like
e1udyD3 D:242-394 Bromodomain-like Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like

Structural contacts of domain e1udyC3 of H-group "Acyl-CoA dehydrogenase C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1udyB2 C:x,y,z->B:X,Y,Z Acyl-CoA dehydrogenase N-terminal domain-like Interaction Interface Pymol
e1udyB3 C:x,y,z->B:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e1udyD1 C:X,Y,Z->D:x,y,z Acyl-CoA dehydrogenase middle domain-like Interaction Interface Pymol
e1udyD3 C:X,Y,Z->D:x,y,z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol
e1udyC2 C:x,y,z->C:-X,Y-1/2,-Z+3/2 Acyl-CoA dehydrogenase N-terminal domain-like Interaction Interface Pymol
e1udyA3 C:x,y,z->A:X,Y,Z Acyl-CoA dehydrogenase C-terminal domain-like Interaction Interface Pymol