| UID: | 000111088 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2bfdA1 |
| Range: | C:6-366 |
| Ligands: | COI MG TDP |
| PDB: | 1umd |
| PDB Description: | 2-oxo acid dehydrogenase alpha subunit |
| UniProt: | Q5SLR4 |
| Hsap BLAST neighbor: | P12694 |
| Species: | Thermus thermophilus |
Structure of domain e1umdC1
Domains in the same chain:
| e1umdC1 | C:6-366 | Thiamin diphosphate-binding fold (THDP-binding) | Thiamin diphosphate-binding fold (THDP-binding) | Thiamin diphosphate-binding fold (THDP-binding) |
Domains in the same PDB:
Structural contacts of domain e1umdC1 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1umdD2 | C:X,Y,Z->D:x,y,z | Thiamin diphosphate-binding fold (THDP-binding) | Interaction Interface Pymol |
| e1umdD1 | C:X,Y,Z->D:x,y,z | TK C-terminal domain-like | Interaction Interface Pymol |
| e1umdB1 | C:X,Y,Z->B:x,y,z | TK C-terminal domain-like | Interaction Interface Pymol |
| e1umdB2 | C:X,Y,Z->B:x,y,z | Thiamin diphosphate-binding fold (THDP-binding) | Interaction Interface Pymol |
| e1umdA1 | C:x,y,z->A:X,Y,Z | Thiamin diphosphate-binding fold (THDP-binding) | Interaction Interface Pymol |
| e1umdA1 | C:-X+1/2,-Y+1/2,Z-1/2->A:x,y,z | Thiamin diphosphate-binding fold (THDP-binding) | Interaction Interface Pymol |
| e1umdA1 | C:x,y,z->A:X-1/2,-Y+1/2,-Z+1 | Thiamin diphosphate-binding fold (THDP-binding) | Interaction Interface Pymol |
