ECOD: domain e1uw4C1

Domain ID e1uw4C1

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: Smg4_UPF3

UID:	000064021
Type:	Automatic domain
Parent:	e1uw4A1
Range:	C:50-140
PDB:	1uw4
PDB Description:	UPF3X
UniProt:	Q9BZI7
Hsap BLAST neighbor:	Q9BZI7
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1uw4C1	C:50-140	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e1uw4A1	A:50-140	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e1uw4B1	B:768-1015	Repetitive alpha hairpins	ARM repeat	ARM repeat
e1uw4C1	C:50-140	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e1uw4D1	D:768-1015	Repetitive alpha hairpins	ARM repeat	ARM repeat

Structural contacts of domain e1uw4C1 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1uw4D1	C:X,Y,Z->D:x,y,z	ARM repeat	Interaction Interface Pymol
e1uw4B1	C:X,Y,Z->B:x,y,z	ARM repeat	Interaction Interface Pymol
e1uw4D1	C:-X+2,-Y,Z->D:x,y,z	ARM repeat	Interaction Interface Pymol
e1uw4C1	C:x,y,z->C:-X+1,-Y,Z	RNA-binding domain, RBD	Interaction Interface Pymol
e1uw4C1	C:-X+1,-Y,Z->C:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol
e1uw4A1	C:x,y,z->A:X-1,Y,Z	RNA-binding domain, RBD	Interaction Interface Pymol