Domain ID e1v0fB1

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  • A: beta duplicates or obligate multimers
  • X: Single-stranded right-handed beta-helix
  • H: Pectin lyase-like
  • T: Pectin lyase-like
  • F: End_N_terminal
UID: 001338981
Type: Automatic domain
Parent: e1v0eA5
Range: B:245-311
PDB: 1v0f
PDB Description: ENDO-ALPHA-SIALIDASE
UniProt: Q858B1
Species: Enterobacteria phage K1F

Structure of domain e1v0fB1

Domains in the same chain:

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e1v0fB1 B:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0fB4 B:312-422,B:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0fB3 B:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0fB2 B:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain

Domains in the same PDB:

e1v0fA1 A:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0fA4 A:312-422,A:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0fA3 A:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0fA2 A:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0fB1 B:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0fB4 B:312-422,B:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0fB3 B:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0fB2 B:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0fC1 C:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0fC4 C:312-422,C:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0fC3 C:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0fC2 C:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0fD1 D:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0fD4 D:312-422,D:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0fD3 D:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0fD2 D:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0fE1 E:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0fE4 E:312-422,E:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0fE3 E:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0fE2 E:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0fF1 F:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0fF4 F:312-422,F:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0fF3 F:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0fF2 F:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain

Structural contacts of domain e1v0fB1 of H-group "Pectin lyase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1v0fA1 B:x,y,z->A:X,Y,Z Pectin lyase-like Interaction Interface Pymol
e1v0fC4 B:X,Y,Z->C:x,y,z beta-propeller Interaction Interface Pymol
e1v0fC2 B:X,Y,Z->C:x,y,z Phage tail fiber protein trimerization domain Interaction Interface Pymol
e1v0fC1 B:X,Y,Z->C:x,y,z Pectin lyase-like Interaction Interface Pymol
e1v0fE3 B:X,Y-1,Z->E:x,y,z RIFT-related Interaction Interface Pymol