ECOD: domain e1v33A2

Domain ID e1v33A2

A: a+b complex topology
X: Prim-pol domain
H: Prim-pol domain
T: Prim-pol domain
F: DNA_primase_S

UID:	000007176
Type:	Manual and representative domain
Range:	A:1-176,A:280-346
Ligands:	PO4 ZN
PDB:	1v33
PDB Description:	DNA PRIMASE SMALL SUBUNIT
UniProt:	O57934
Hsap BLAST neighbor:	P49642
Species:	Pyrococcus horikoshii

Domains in the same chain:

Download Pymol

e1v33A2	A:1-176,A:280-346	Prim-pol domain	Prim-pol domain	Prim-pol domain
e1v33A1	A:177-279	Insert all-alpha domain in prim-pol	Insert all-alpha domain in prim-pol	Insert all-alpha domain in prim-pol

Domains in the same PDB:

e1v33A2	A:1-176,A:280-346	Prim-pol domain	Prim-pol domain	Prim-pol domain
e1v33A1	A:177-279	Insert all-alpha domain in prim-pol	Insert all-alpha domain in prim-pol	Insert all-alpha domain in prim-pol

Structural contacts of domain e1v33A2 of H-group "Prim-pol domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1v33A1	A:x,y,z->A:-X+1,-X+Y,-Z+2/3	Insert all-alpha domain in prim-pol	Interaction Interface Pymol
e1v33A2	A:x,y,z->A:-X+1,-X+Y,-Z+2/3	Prim-pol domain	Interaction Interface Pymol
e1v33A2	A:-X+1,-X+Y,-Z+2/3->A:x,y,z	Prim-pol domain	Interaction Interface Pymol
e1v33A2	A:x,y,z->A:X-Y+1,-Y+2,-Z+1/3	Prim-pol domain	Interaction Interface Pymol
e1v33A2	A:X-Y+1,-Y+2,-Z+1/3->A:x,y,z	Prim-pol domain	Interaction Interface Pymol
e1v33A2	A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3	Prim-pol domain	Interaction Interface Pymol
e1v33A2	A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z	Prim-pol domain	Interaction Interface Pymol
e1v33A1	A:x,y,z->A:-Y+1,X-Y+1,Z-1/3	Insert all-alpha domain in prim-pol	Interaction Interface Pymol
e1v33A1	A:Y-1,X,-Z+1->A:x,y,z	Insert all-alpha domain in prim-pol	Interaction Interface Pymol