ECOD: domain e1v54T1

Domain ID e1v54T1

A: extended segments
X: Mitochondrial cytochrome c oxidase subunit VIa
H: Mitochondrial cytochrome c oxidase subunit VIa
T: Mitochondrial cytochrome c oxidase subunit VIa
F: COX6A

UID:	000060872
Type:	Automatic domain
Parent:	e1v54G1
Range:	T:1-84
Ligands:	CDL CHD PEK PGV
PDB:	1v54
PDB Description:	CYTOCHROME C OXIDASE POLYPEPTIDE VIA-HEART
UniProt:	P07471
Hsap BLAST neighbor:	Q02221
Species:	Bos taurus

Domain
In chain context
In PDB context

Structure of domain e1v54T1

Domains in the same chain:

Download Pymol

e1v54T1	T:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa

Domains in the same PDB:

Structural contacts of domain e1v54T1 of H-group "Mitochondrial cytochrome c oxidase subunit VIa":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1v54P1	T:x,y,z->P:X,Y,Z	Cytochrome c oxidase subunit III-like	Interaction Interface Pymol
e1v54A1	T:x,y,z->A:X,Y,Z	Cytochrome c oxidase subunit I-like	Interaction Interface Pymol
e1v54N1	T:x,y,z->N:X,Y,Z	Cytochrome c oxidase subunit I-like	Interaction Interface Pymol
e1v54U1	T:X,Y,Z->U:x,y,z	Cytochrome c oxidase subunit h	Interaction Interface Pymol
e1v54S1	T:x,y,z->S:X,Y,Z	Rubredoxin-related	Interaction Interface Pymol
e1v54F1	T:x,y,z->F:X,Y,Z	Rubredoxin-related	Interaction Interface Pymol

e1v54A1	A:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like
e1v54B2	B:1-90	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region
e1v54B1	B:91-227	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e1v54C1	C:3-261	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like
e1v54D1	D:4-147	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV
e1v54E1	E:5-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E
e1v54F1	F:1-98	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e1v54G1	G:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa
e1v54H1	H:7-85	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h
e1v54I1	I:1-73	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc
e1v54J1	J:1-58	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa
e1v54K1	K:6-54	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb
e1v54L1	L:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1v54M1	M:1-43	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e1v54N1	N:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like
e1v54O2	O:1-90	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region
e1v54O1	O:91-227	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e1v54P1	P:3-261	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like
e1v54Q1	Q:4-147	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV
e1v54R1	R:5-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E
e1v54S1	S:1-98	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e1v54T1	T:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa
e1v54U1	U:7-85	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h
e1v54V1	V:1-73	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc
e1v54W1	W:1-58	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa
e1v54X1	X:6-54	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb
e1v54Y1	Y:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1v54Z1	Z:1-43	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)